Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.96□□□□□ -0.34
TFF3Q07654 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TFF3Q07654 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TFF3Q07654 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.96□□□□□ -0.34
TFF3Q07654 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TFF3Q07654 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TFF3Q07654 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.96□□□□□ -0.34
TFF3Q07654 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TFF3Q07654 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
TFF3Q07654 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.96□□□□□ -0.34
TFF3Q07654 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TFF3Q07654 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TFF3Q07654 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TFF3Q07654 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TFF3Q07654 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 CICP24-201ENST00000605464 2705 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.95□□□□□ -0.34
TFF3Q07654 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 TLE1P1-201ENST00000422965 589 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 AL157407.1-201ENST00000435784 904 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.95□□□□□ -0.34
TFF3Q07654 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 RN7SL67P-201ENST00000492147 296 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 PGAM1P5-201ENST00000548011 764 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 AC135983.4-201ENST00000564116 1262 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.95□□□□□ -0.34
TFF3Q07654 AC138894.2-201ENST00000602838 371 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 BX088702.1-201ENST00000610784 235 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 AC090616.6-203ENST00000579186 1945 ntBASIC12.95□□□□□ -0.34
TFF3Q07654 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TFF3Q07654 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TFF3Q07654 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TFF3Q07654 FAM90A2P-201ENST00000511144 1395 ntBASIC12.94□□□□□ -0.34
TFF3Q07654 FAM90A25P-201ENST00000528404 1395 ntBASIC12.94□□□□□ -0.34
TFF3Q07654 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TFF3Q07654 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.94□□□□□ -0.34
TFF3Q07654 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TFF3Q07654 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.94□□□□□ -0.34
TFF3Q07654 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.94□□□□□ -0.34
TFF3Q07654 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.94□□□□□ -0.34
TFF3Q07654 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.94□□□□□ -0.34
TFF3Q07654 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TFF3Q07654 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TFF3Q07654 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TFF3Q07654 CICP12-201ENST00000455801 843 ntBASIC12.94□□□□□ -0.34
TFF3Q07654 RN7SL8P-201ENST00000461771 266 ntBASIC12.94□□□□□ -0.34
TFF3Q07654 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.94□□□□□ -0.34
TFF3Q07654 AC006122.1-201ENST00000493323 440 ntBASIC12.94□□□□□ -0.34
TFF3Q07654 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.94□□□□□ -0.34
TFF3Q07654 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.94□□□□□ -0.34
TFF3Q07654 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms