Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ERCC2P18074 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
ERCC2P18074 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.17■□□□□ 0.02
ERCC2P18074 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ERCC2P18074 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ERCC2P18074 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.16■□□□□ 0.02
ERCC2P18074 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ERCC2P18074 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.16■□□□□ 0.02
ERCC2P18074 RN7SL832P-201ENST00000607781 1756 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ERCC2P18074 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ERCC2P18074 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 AC027601.5-201ENST00000624065 2482 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 LINC01230-201ENST00000625222 3017 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 AC090505.1-201ENST00000430515 1834 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 MIR326-201ENST00000362220 95 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC2P18074 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.16■□□□□ 0.02
ERCC2P18074 ATP5G2P4-201ENST00000442175 420 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 YBX1P6-201ENST00000442962 1002 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 AC100850.1-201ENST00000506768 649 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.16■□□□□ 0.02
ERCC2P18074 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC2P18074 DUX4L45-201ENST00000566406 1057 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC2P18074 MIR6074-201ENST00000612054 107 ntBASIC15.16■□□□□ 0.02
ERCC2P18074 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.16■□□□□ 0.02
ERCC2P18074 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC2P18074 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.16■□□□□ 0.02
ERCC2P18074 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.16■□□□□ 0.02
ERCC2P18074 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.16■□□□□ 0.02
ERCC2P18074 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ERCC2P18074 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ERCC2P18074 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ERCC2P18074 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ERCC2P18074 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.15■□□□□ 0.02
ERCC2P18074 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ERCC2P18074 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ERCC2P18074 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.15■□□□□ 0.02
ERCC2P18074 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.15■□□□□ 0.02
ERCC2P18074 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.15■□□□□ 0.02
ERCC2P18074 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ERCC2P18074 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 AL035414.1-201ENST00000451327 857 ntBASIC15.15■□□□□ 0.02
ERCC2P18074 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.15■□□□□ 0.02
ERCC2P18074 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.15■□□□□ 0.02
ERCC2P18074 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms