Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.79□□□□□ -0.04
VCANP13611 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC14.79□□□□□ -0.04
VCANP13611 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC14.79□□□□□ -0.04
VCANP13611 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC14.79□□□□□ -0.04
VCANP13611 FAM223B-202ENST00000598177 713 ntBASIC14.79□□□□□ -0.04
VCANP13611 FAM223A-202ENST00000625204 713 ntBASIC14.79□□□□□ -0.04
VCANP13611 ESR1-214ENST00000638569 132 ntTSL 5 BASIC14.79□□□□□ -0.04
VCANP13611 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
VCANP13611 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
VCANP13611 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
VCANP13611 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.79□□□□□ -0.04
VCANP13611 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.79□□□□□ -0.04
VCANP13611 AL137244.1-201ENST00000422931 865 ntBASIC14.79□□□□□ -0.04
VCANP13611 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.79□□□□□ -0.04
VCANP13611 URAHP-205ENST00000610227 398 ntBASIC14.79□□□□□ -0.04
VCANP13611 AC134878.2-201ENST00000620700 1265 ntBASIC14.79□□□□□ -0.04
VCANP13611 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
VCANP13611 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
VCANP13611 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 AC069061.4-201ENST00000581294 1347 ntBASIC14.79□□□□□ -0.04
VCANP13611 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.79□□□□□ -0.04
VCANP13611 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.79□□□□□ -0.04
VCANP13611 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 RN7SKP212-201ENST00000410851 328 ntBASIC14.79□□□□□ -0.04
VCANP13611 RPL18AP16-201ENST00000424057 531 ntBASIC14.79□□□□□ -0.04
VCANP13611 AC008021.1-201ENST00000474180 414 ntBASIC14.79□□□□□ -0.04
VCANP13611 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
VCANP13611 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VCANP13611 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
VCANP13611 AC022532.1-201ENST00000624563 1728 ntBASIC14.79□□□□□ -0.04
VCANP13611 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 AC139749.1-202ENST00000617529 3139 ntBASIC14.78□□□□□ -0.04
VCANP13611 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VCANP13611 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
VCANP13611 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
VCANP13611 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.78□□□□□ -0.04
VCANP13611 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.78□□□□□ -0.04
VCANP13611 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.78□□□□□ -0.04
VCANP13611 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.78□□□□□ -0.04
VCANP13611 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VCANP13611 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 AL353708.1-201ENST00000567904 1257 ntBASIC14.78□□□□□ -0.04
VCANP13611 SIGLEC22P-201ENST00000599104 714 ntBASIC14.78□□□□□ -0.04
VCANP13611 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.78□□□□□ -0.04
VCANP13611 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.78□□□□□ -0.04
VCANP13611 ZBED1P1-201ENST00000502364 1930 ntBASIC14.78□□□□□ -0.04
VCANP13611 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.78□□□□□ -0.04
VCANP13611 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
VCANP13611 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.78□□□□□ -0.04
VCANP13611 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.78□□□□□ -0.04
VCANP13611 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.78□□□□□ -0.04
VCANP13611 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC14.78□□□□□ -0.04
VCANP13611 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.78□□□□□ -0.04
VCANP13611 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.78□□□□□ -0.04
VCANP13611 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VCANP13611 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VCANP13611 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VCANP13611 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VCANP13611 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms