Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC19.72■□□□□ 0.75
CHD2O14647 FAM187B2P-201ENST00000577135 713 ntBASIC19.72■□□□□ 0.75
CHD2O14647 KRT8P34-201ENST00000577607 1044 ntBASIC19.72■□□□□ 0.75
CHD2O14647 AC132825.4-202ENST00000578792 434 ntBASIC19.72■□□□□ 0.75
CHD2O14647 RN7SL121P-201ENST00000584223 273 ntBASIC19.72■□□□□ 0.75
CHD2O14647 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CHD2O14647 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHD2O14647 AL050341.2-201ENST00000567508 1541 ntBASIC19.72■□□□□ 0.75
CHD2O14647 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CHD2O14647 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD2O14647 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC19.72■□□□□ 0.75
CHD2O14647 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CHD2O14647 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CHD2O14647 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD2O14647 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CHD2O14647 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CHD2O14647 AC103592.1-201ENST00000394513 664 ntBASIC19.72■□□□□ 0.75
CHD2O14647 TBC1D27-202ENST00000424239 1573 ntBASIC19.72■□□□□ 0.75
CHD2O14647 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD2O14647 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC19.72■□□□□ 0.75
CHD2O14647 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC19.72■□□□□ 0.75
CHD2O14647 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CHD2O14647 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 MYADML-201ENST00000474610 2147 ntBASIC19.71■□□□□ 0.75
CHD2O14647 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 AC018442.1-201ENST00000421439 2061 ntBASIC19.71■□□□□ 0.75
CHD2O14647 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.71■□□□□ 0.75
CHD2O14647 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHD2O14647 SHMT1P1-201ENST00000419974 1312 ntBASIC19.71■□□□□ 0.75
CHD2O14647 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
CHD2O14647 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 AL136084.1-201ENST00000449172 318 ntBASIC19.71■□□□□ 0.75
CHD2O14647 IGKV1OR-2-201ENST00000457995 350 ntBASIC19.71■□□□□ 0.75
CHD2O14647 ACY3-202ENST00000529256 933 ntTSL 3 BASIC19.71■□□□□ 0.75
CHD2O14647 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD2O14647 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CHD2O14647 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CHD2O14647 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.7■□□□□ 0.74
CHD2O14647 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC19.7■□□□□ 0.74
CHD2O14647 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHD2O14647 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD2O14647 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC19.7■□□□□ 0.74
CHD2O14647 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC19.7■□□□□ 0.74
CHD2O14647 AL137244.1-201ENST00000422931 865 ntBASIC19.7■□□□□ 0.74
CHD2O14647 RPL18AP16-201ENST00000424057 531 ntBASIC19.7■□□□□ 0.74
CHD2O14647 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD2O14647 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD2O14647 AC133141.1-201ENST00000443015 339 ntBASIC19.7■□□□□ 0.74
CHD2O14647 RHOQP2-201ENST00000449922 579 ntBASIC19.7■□□□□ 0.74
CHD2O14647 BAK1P2-201ENST00000532665 631 ntBASIC19.7■□□□□ 0.74
CHD2O14647 URB1-AS1-201ENST00000534991 831 ntBASIC19.7■□□□□ 0.74
CHD2O14647 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC19.7■□□□□ 0.74
CHD2O14647 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC19.7■□□□□ 0.74
CHD2O14647 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 AL354702.1-201ENST00000442006 1960 ntBASIC19.7■□□□□ 0.74
CHD2O14647 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD2O14647 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD2O14647 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CHD2O14647 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD2O14647 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD2O14647 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD2O14647 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
CHD2O14647 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD2O14647 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD2O14647 HNRNPA1P25-201ENST00000422644 937 ntBASIC19.69■□□□□ 0.74
CHD2O14647 GULOP-201ENST00000454030 748 ntBASIC19.69■□□□□ 0.74
CHD2O14647 CD44-224ENST00000526669 870 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD2O14647 AC016582.2-202ENST00000587765 1094 ntBASIC19.69■□□□□ 0.74
CHD2O14647 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD2O14647 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD2O14647 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD2O14647 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CHD2O14647 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD2O14647 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD2O14647 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms