Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZC3H4Q9UPT8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 RN7SL767P-201ENST00000493013 295 ntBASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 CHCHD2P2-201ENST00000503744 321 ntBASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AC008972.2-201ENST00000606587 494 ntBASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AC011462.4-201ENST00000616866 449 ntBASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 AC010491.1-201ENST00000563101 2797 ntBASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H4Q9UPT8 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 AC108734.2-201ENST00000420887 1069 ntBASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 AC090136.2-201ENST00000517809 420 ntBASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 TREHP1-201ENST00000531328 465 ntBASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ZC3H4Q9UPT8 AC073347.1-201ENST00000421633 2643 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms