Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 RNU1-114P-201ENST00000365297 166 ntBASIC13.24□□□□□ -0.29
COPS3Q9UNS2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 MIR1233-2-201ENST00000408138 82 ntBASIC13.24□□□□□ -0.29
COPS3Q9UNS2 MIR1233-1-201ENST00000408722 82 ntBASIC13.24□□□□□ -0.29
COPS3Q9UNS2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 NUS1P3-201ENST00000423502 862 ntBASIC13.24□□□□□ -0.29
COPS3Q9UNS2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 TPRX2P-201ENST00000535362 881 ntBASIC13.24□□□□□ -0.29
COPS3Q9UNS2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 BRI3BPP1-201ENST00000594224 787 ntBASIC13.24□□□□□ -0.29
COPS3Q9UNS2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.24□□□□□ -0.29
COPS3Q9UNS2 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 RN7SL832P-201ENST00000607781 1756 ntBASIC13.24□□□□□ -0.29
COPS3Q9UNS2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
COPS3Q9UNS2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 AL390955.2-201ENST00000603032 514 ntBASIC13.23□□□□□ -0.29
COPS3Q9UNS2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.23□□□□□ -0.29
COPS3Q9UNS2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms