Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LIMK2P53671 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.92□□□□□ -0.02
LIMK2P53671 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.92□□□□□ -0.02
LIMK2P53671 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
LIMK2P53671 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LIMK2P53671 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 MIR1908-201ENST00000410394 80 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.92□□□□□ -0.02
LIMK2P53671 KLF2P2-201ENST00000416807 1039 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 TLE1P1-201ENST00000422965 589 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 C2orf27AP3-201ENST00000434123 579 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 EIF3FP3-201ENST00000434851 1086 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.92□□□□□ -0.02
LIMK2P53671 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.92□□□□□ -0.02
LIMK2P53671 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.92□□□□□ -0.02
LIMK2P53671 MIR4525-201ENST00000580000 75 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 AC244669.2-201ENST00000612320 853 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 AL354718.3-201ENST00000616414 581 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 CR382287.1-201ENST00000623954 586 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 RHOXF1P1-202ENST00000635473 501 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LIMK2P53671 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.92□□□□□ -0.02
LIMK2P53671 AC016397.2-201ENST00000624848 1985 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK2P53671 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LIMK2P53671 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LIMK2P53671 AC090505.1-201ENST00000430515 1834 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK2P53671 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK2P53671 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LIMK2P53671 AC104581.4-201ENST00000623126 3052 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 MST1P2-201ENST00000457982 2291 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK2P53671 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.91□□□□□ -0.02
LIMK2P53671 SALL4P5-201ENST00000419001 1760 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LIMK2P53671 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 AC003102.2-201ENST00000589195 1469 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LIMK2P53671 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK2P53671 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 AC007969.1-201ENST00000433675 447 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LIMK2P53671 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 KRT90P-201ENST00000549264 1064 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.91□□□□□ -0.02
LIMK2P53671 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.91□□□□□ -0.02
LIMK2P53671 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK2P53671 GNRHR2-203ENST00000581100 1187 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 MIR4538-201ENST00000581377 78 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 RN7SL219P-201ENST00000582872 296 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 AP005019.2-201ENST00000615104 511 ntBASIC14.91□□□□□ -0.02
LIMK2P53671 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LIMK2P53671 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LIMK2P53671 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.91□□□□□ -0.02
LIMK2P53671 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK2P53671 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LIMK2P53671 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK2P53671 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LIMK2P53671 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK2P53671 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK2P53671 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms