Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLIC1O00299 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIC1O00299 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIC1O00299 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLIC1O00299 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLIC1O00299 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLIC1O00299 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLIC1O00299 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLIC1O00299 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLIC1O00299 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLIC1O00299 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 KRT8P35-201ENST00000483942 1338 ntBASIC13.97□□□□□ -0.17
CLIC1O00299 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIC1O00299 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLIC1O00299 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 FO681548.1-201ENST00000455617 1132 ntBASIC13.97□□□□□ -0.17
CLIC1O00299 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIC1O00299 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.97□□□□□ -0.17
CLIC1O00299 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.97□□□□□ -0.17
CLIC1O00299 AC004466.1-201ENST00000599515 1080 ntBASIC13.97□□□□□ -0.17
CLIC1O00299 AC133539.2-201ENST00000604757 467 ntBASIC13.97□□□□□ -0.17
CLIC1O00299 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.97□□□□□ -0.17
CLIC1O00299 AC106028.4-201ENST00000614509 607 ntBASIC13.97□□□□□ -0.17
CLIC1O00299 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CLIC1O00299 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLIC1O00299 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.97□□□□□ -0.17
CLIC1O00299 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLIC1O00299 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.96□□□□□ -0.17
CLIC1O00299 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.96□□□□□ -0.17
CLIC1O00299 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLIC1O00299 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.96□□□□□ -0.17
CLIC1O00299 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLIC1O00299 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.96□□□□□ -0.17
CLIC1O00299 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.96□□□□□ -0.17
CLIC1O00299 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.96□□□□□ -0.17
CLIC1O00299 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.96□□□□□ -0.17
CLIC1O00299 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CLIC1O00299 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.96□□□□□ -0.17
CLIC1O00299 AC123567.1-201ENST00000548294 1261 ntBASIC13.96□□□□□ -0.17
CLIC1O00299 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.96□□□□□ -0.17
CLIC1O00299 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.96□□□□□ -0.17
CLIC1O00299 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CLIC1O00299 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLIC1O00299 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.96□□□□□ -0.17
CLIC1O00299 AC005252.2-201ENST00000624630 1141 ntBASIC13.96□□□□□ -0.17
CLIC1O00299 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.96□□□□□ -0.17
CLIC1O00299 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.96□□□□□ -0.17
CLIC1O00299 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLIC1O00299 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLIC1O00299 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CLIC1O00299 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLIC1O00299 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CLIC1O00299 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLIC1O00299 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms