Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 OR2I1P-209ENST00000641730 5365 ntBASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ATG4BQ9Y4P1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 MYADML-201ENST00000474610 2147 ntBASIC14□□□□□ -0.17
ATG4BQ9Y4P1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 PUDPP3-201ENST00000445368 636 ntBASIC14□□□□□ -0.17
ATG4BQ9Y4P1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AC103988.2-201ENST00000561804 725 ntBASIC14□□□□□ -0.17
ATG4BQ9Y4P1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 PPY2P-201ENST00000582808 702 ntBASIC14□□□□□ -0.17
ATG4BQ9Y4P1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 Six3os1_5.1-201ENST00000611000 271 ntBASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AC008687.7-202ENST00000637404 953 ntBASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATG4BQ9Y4P1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AC139712.1-201ENST00000378256 1875 ntBASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AC117489.1-201ENST00000625169 3217 ntBASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AL136309.1-201ENST00000403917 691 ntBASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AC007274.1-201ENST00000439805 662 ntBASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 CNN2P10-201ENST00000443067 918 ntBASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.99□□□□□ -0.17
ATG4BQ9Y4P1 AC079316.1-201ENST00000548397 411 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms