Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 HLA-A-201ENST00000376802 1334 ntBASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 AC027601.4-201ENST00000611259 610 ntBASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 AC007967.4-201ENST00000614700 386 ntBASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 MAPK10-262ENST00000641051 5738 ntBASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KCNIP3Q9Y2W7 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AC005237.2-201ENST00000434368 219 ntBASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 LINC00628-201ENST00000628516 1289 ntBASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AF228730.6-201ENST00000641497 218 ntBASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AC084121.3-201ENST00000641716 218 ntBASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AC020910.6-201ENST00000623084 1459 ntBASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AC105206.1-202ENST00000314927 2368 ntBASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
KCNIP3Q9Y2W7 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms