Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 SPDYE18-201ENST00000510091 1050 ntBASIC16.54■□□□□ 0.24
CBX8Q9HC52 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 AC027612.4-201ENST00000605371 583 ntBASIC16.54■□□□□ 0.24
CBX8Q9HC52 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CBX8Q9HC52 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX8Q9HC52 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 UPF3AP3-201ENST00000420996 769 ntBASIC16.53■□□□□ 0.24
CBX8Q9HC52 TLE1P1-201ENST00000422965 589 ntBASIC16.53■□□□□ 0.24
CBX8Q9HC52 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 AC092580.3-201ENST00000430932 139 ntBASIC16.53■□□□□ 0.24
CBX8Q9HC52 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 AC022616.1-201ENST00000518688 554 ntBASIC16.53■□□□□ 0.24
CBX8Q9HC52 AC131206.1-201ENST00000538078 1211 ntBASIC16.53■□□□□ 0.24
CBX8Q9HC52 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CBX8Q9HC52 AL365181.3-201ENST00000605886 3222 ntBASIC16.53■□□□□ 0.24
CBX8Q9HC52 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX8Q9HC52 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CBX8Q9HC52 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CBX8Q9HC52 Z82170.1-201ENST00000625081 3192 ntBASIC16.52■□□□□ 0.24
CBX8Q9HC52 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CBX8Q9HC52 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CBX8Q9HC52 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.52■□□□□ 0.24
CBX8Q9HC52 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CBX8Q9HC52 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.52■□□□□ 0.24
CBX8Q9HC52 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.52■□□□□ 0.24
CBX8Q9HC52 RPSAP43-201ENST00000402237 625 ntBASIC16.52■□□□□ 0.24
CBX8Q9HC52 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.52■□□□□ 0.24
CBX8Q9HC52 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX8Q9HC52 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.52■□□□□ 0.24
CBX8Q9HC52 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms