Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 AC011840.2-201ENST00000563063 1520 ntBASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 MIR346-201ENST00000362234 95 ntBASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AC055717.3-201ENST00000622967 595 ntBASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AC105339.1-204ENST00000636249 355 ntBASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AL157414.3-201ENST00000624276 1954 ntBASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.96□□□□□ -0.01
CHMP6Q96FZ7 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CHMP6Q96FZ7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHMP6Q96FZ7 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CHMP6Q96FZ7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHMP6Q96FZ7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CHMP6Q96FZ7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHMP6Q96FZ7 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.96□□□□□ -0.02
CHMP6Q96FZ7 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CHMP6Q96FZ7 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.96□□□□□ -0.02
CHMP6Q96FZ7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 AC004899.2-201ENST00000622993 3860 ntBASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 LINC01225-203ENST00000563550 1244 ntBASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 RARRES2P9-201ENST00000565168 469 ntBASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 AC003101.2-201ENST00000612557 442 ntBASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
CHMP6Q96FZ7 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms