Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HLA-CQ95604 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
HLA-CQ95604 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.02□□□□□ -0.01
HLA-CQ95604 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
HLA-CQ95604 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-CQ95604 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-CQ95604 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-CQ95604 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-CQ95604 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-CQ95604 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-CQ95604 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-CQ95604 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-CQ95604 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-CQ95604 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 AC104961.1-201ENST00000427605 771 ntBASIC15.01□□□□□ -0.01
HLA-CQ95604 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-CQ95604 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-CQ95604 AC095040.1-201ENST00000513286 675 ntBASIC15.01□□□□□ -0.01
HLA-CQ95604 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.01□□□□□ -0.01
HLA-CQ95604 KRT18P37-201ENST00000520711 1282 ntBASIC15.01□□□□□ -0.01
HLA-CQ95604 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-CQ95604 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-CQ95604 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-CQ95604 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-CQ95604 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 AC140658.4-201ENST00000561990 352 ntBASIC15.01□□□□□ -0.01
HLA-CQ95604 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-CQ95604 AC108673.2-201ENST00000608909 565 ntBASIC15.01□□□□□ -0.01
HLA-CQ95604 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-CQ95604 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-CQ95604 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-CQ95604 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
HLA-CQ95604 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 FER1L4-210ENST00000615531 5998 ntBASIC15.01□□□□□ -0.01
HLA-CQ95604 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-CQ95604 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-CQ95604 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-CQ95604 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15□□□□□ -0.01
HLA-CQ95604 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HLA-CQ95604 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15□□□□□ -0.01
HLA-CQ95604 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HLA-CQ95604 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-CQ95604 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HLA-CQ95604 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HLA-CQ95604 AL590440.2-201ENST00000641973 1595 ntBASIC15□□□□□ -0.01
HLA-CQ95604 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15□□□□□ -0.01
HLA-CQ95604 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15□□□□□ -0.01
HLA-CQ95604 YY1P1-201ENST00000427625 668 ntBASIC15□□□□□ -0.01
HLA-CQ95604 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
HLA-CQ95604 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15□□□□□ -0.01
HLA-CQ95604 RN7SL147P-201ENST00000487345 298 ntBASIC15□□□□□ -0.01
HLA-CQ95604 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15□□□□□ -0.01
HLA-CQ95604 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC15□□□□□ -0.01
HLA-CQ95604 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC15□□□□□ -0.01
HLA-CQ95604 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15□□□□□ -0.01
HLA-CQ95604 NDUFB10P1-201ENST00000567319 521 ntBASIC15□□□□□ -0.01
HLA-CQ95604 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC15□□□□□ -0.01
HLA-CQ95604 MIR4254-201ENST00000581063 76 ntBASIC15□□□□□ -0.01
HLA-CQ95604 TYMSP2-201ENST00000589501 424 ntBASIC15□□□□□ -0.01
HLA-CQ95604 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 PCDHB19P-201ENST00000570871 2371 ntBASIC15□□□□□ -0.01
HLA-CQ95604 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HLA-CQ95604 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HLA-CQ95604 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-CQ95604 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15□□□□□ -0.01
HLA-CQ95604 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
HLA-CQ95604 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.99□□□□□ -0.01
HLA-CQ95604 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HLA-CQ95604 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.99□□□□□ -0.01
HLA-CQ95604 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLA-CQ95604 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms