Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 TIMM8BP1-201ENST00000452384 211 ntBASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 AL079307.3-201ENST00000556114 283 ntBASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 AP001005.1-201ENST00000571755 1248 ntBASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 AC007967.4-201ENST00000614700 386 ntBASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 AP000437.1-201ENST00000624057 2085 ntBASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 AL136172.1-201ENST00000598590 1394 ntBASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SMIM4Q8WVI0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AC004899.2-201ENST00000622993 3860 ntBASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 POM121L14P-201ENST00000406100 1558 ntBASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 YBX2P1-201ENST00000394192 760 ntBASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AC136604.1-202ENST00000425471 771 ntBASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 MTND6P24-201ENST00000440466 518 ntBASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AL592309.1-201ENST00000443127 649 ntBASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 GAPDHP40-201ENST00000505218 1006 ntBASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AL033527.5-202ENST00000641632 1098 ntBASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SMIM4Q8WVI0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms