Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 TPT1P11-201ENST00000458482 498 ntBASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 RRP7BP-205ENST00000566851 833 ntBASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 SPDYE22P-201ENST00000582158 798 ntBASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 AL354702.1-201ENST00000442006 1960 ntBASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC50Q8IVM0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 AL731571.1-201ENST00000617058 5428 ntBASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 AL139094.1-201ENST00000405549 1188 ntBASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 AC093004.1-201ENST00000508850 424 ntBASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 AC055876.2-201ENST00000531834 546 ntBASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 AC006538.3-201ENST00000612495 578 ntBASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC50Q8IVM0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC50Q8IVM0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC50Q8IVM0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC50Q8IVM0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC50Q8IVM0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CCDC50Q8IVM0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CCDC50Q8IVM0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.71■□□□□ 0.1
CCDC50Q8IVM0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 KRT8P14-201ENST00000414254 1442 ntBASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC50Q8IVM0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms