Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.79□□□□□ -0.36
ACTBP60709 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ACTBP60709 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.79□□□□□ -0.36
ACTBP60709 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.79□□□□□ -0.36
ACTBP60709 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.79□□□□□ -0.36
ACTBP60709 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.79□□□□□ -0.36
ACTBP60709 AL589739.1-201ENST00000607720 493 ntBASIC12.79□□□□□ -0.36
ACTBP60709 AL133215.2-201ENST00000609242 977 ntBASIC12.79□□□□□ -0.36
ACTBP60709 MIR6069-201ENST00000620069 79 ntBASIC12.79□□□□□ -0.36
ACTBP60709 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ACTBP60709 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.79□□□□□ -0.36
ACTBP60709 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 TUBB3P1-201ENST00000405796 1332 ntBASIC12.79□□□□□ -0.36
ACTBP60709 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ACTBP60709 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ACTBP60709 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ACTBP60709 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.79□□□□□ -0.36
ACTBP60709 AC005562.1-201ENST00000583030 3219 ntBASIC12.79□□□□□ -0.36
ACTBP60709 MIR193BHG-211ENST00000641433 5365 ntBASIC12.79□□□□□ -0.36
ACTBP60709 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ACTBP60709 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.79□□□□□ -0.36
ACTBP60709 CETN4P-206ENST00000642099 2168 ntBASIC12.79□□□□□ -0.36
ACTBP60709 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ACTBP60709 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ACTBP60709 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.78□□□□□ -0.36
ACTBP60709 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.78□□□□□ -0.36
ACTBP60709 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.78□□□□□ -0.36
ACTBP60709 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 AC125807.1-201ENST00000483097 614 ntBASIC12.78□□□□□ -0.36
ACTBP60709 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
ACTBP60709 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ACTBP60709 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
ACTBP60709 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.78□□□□□ -0.36
ACTBP60709 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.78□□□□□ -0.36
ACTBP60709 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.78□□□□□ -0.36
ACTBP60709 AC006538.3-201ENST00000612495 578 ntBASIC12.78□□□□□ -0.36
ACTBP60709 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.78□□□□□ -0.36
ACTBP60709 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ACTBP60709 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.78□□□□□ -0.36
ACTBP60709 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.78□□□□□ -0.36
ACTBP60709 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ACTBP60709 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ACTBP60709 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.78□□□□□ -0.36
ACTBP60709 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.78□□□□□ -0.36
ACTBP60709 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms