Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 MIR645-201ENST00000385283 94 ntBASIC18.59■□□□□ 0.57
ATP6V1AP38606 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 BCAS2P2-201ENST00000425064 674 ntBASIC18.59■□□□□ 0.57
ATP6V1AP38606 AC092580.1-201ENST00000433998 658 ntBASIC18.59■□□□□ 0.57
ATP6V1AP38606 MIR4472-1-201ENST00000584349 80 ntBASIC18.59■□□□□ 0.57
ATP6V1AP38606 MIR2392-201ENST00000584881 84 ntBASIC18.59■□□□□ 0.57
ATP6V1AP38606 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP6V1AP38606 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V1AP38606 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V1AP38606 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
ATP6V1AP38606 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.58■□□□□ 0.57
ATP6V1AP38606 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V1AP38606 DOC2GP-204ENST00000639052 2548 ntBASIC18.58■□□□□ 0.57
ATP6V1AP38606 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V1AP38606 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V1AP38606 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V1AP38606 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.58■□□□□ 0.57
ATP6V1AP38606 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V1AP38606 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V1AP38606 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V1AP38606 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 AC011247.3-201ENST00000603297 438 ntBASIC18.58■□□□□ 0.56
ATP6V1AP38606 AC007250.1-201ENST00000608934 338 ntBASIC18.58■□□□□ 0.56
ATP6V1AP38606 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V1AP38606 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V1AP38606 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V1AP38606 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP6V1AP38606 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V1AP38606 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.57■□□□□ 0.56
ATP6V1AP38606 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.57■□□□□ 0.56
ATP6V1AP38606 OR8T1P-201ENST00000421347 918 ntBASIC18.57■□□□□ 0.56
ATP6V1AP38606 PSMD4P1-201ENST00000433951 1109 ntBASIC18.57■□□□□ 0.56
ATP6V1AP38606 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 AC073592.2-201ENST00000623062 780 ntBASIC18.57■□□□□ 0.56
ATP6V1AP38606 AC009145.4-201ENST00000625119 1294 ntBASIC18.57■□□□□ 0.56
ATP6V1AP38606 AL451007.2-201ENST00000632004 563 ntBASIC18.57■□□□□ 0.56
ATP6V1AP38606 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 AC006372.4-201ENST00000624122 1543 ntBASIC18.57■□□□□ 0.56
ATP6V1AP38606 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ATP6V1AP38606 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V1AP38606 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATP6V1AP38606 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.56■□□□□ 0.56
ATP6V1AP38606 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms