Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HLA-DOBP13765 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.28□□□□□ -0.28
HLA-DOBP13765 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DOBP13765 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
HLA-DOBP13765 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DOBP13765 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DOBP13765 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DOBP13765 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.27□□□□□ -0.28
HLA-DOBP13765 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
HLA-DOBP13765 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
HLA-DOBP13765 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DOBP13765 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DOBP13765 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DOBP13765 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DOBP13765 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.27□□□□□ -0.28
HLA-DOBP13765 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DOBP13765 AC006504.5-208ENST00000588784 2401 ntBASIC13.27□□□□□ -0.29
HLA-DOBP13765 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 RN7SKP175-201ENST00000408472 289 ntBASIC13.27□□□□□ -0.29
HLA-DOBP13765 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 CNN2P8-201ENST00000421872 913 ntBASIC13.27□□□□□ -0.29
HLA-DOBP13765 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 KRT90P-201ENST00000549264 1064 ntBASIC13.27□□□□□ -0.29
HLA-DOBP13765 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 OR10B1P-201ENST00000601666 907 ntBASIC13.27□□□□□ -0.29
HLA-DOBP13765 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.27□□□□□ -0.29
HLA-DOBP13765 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 AP000593.2-201ENST00000542775 1433 ntBASIC13.27□□□□□ -0.29
HLA-DOBP13765 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 AC015688.4-201ENST00000580780 1647 ntBASIC13.27□□□□□ -0.29
HLA-DOBP13765 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.27□□□□□ -0.29
HLA-DOBP13765 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DOBP13765 AC012617.1-204ENST00000586340 2305 ntBASIC13.27□□□□□ -0.29
HLA-DOBP13765 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DOBP13765 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms