Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 AC007686.3-201ENST00000619017 3487 ntBASIC13.25□□□□□ -0.29
ZIC3O60481 AC144522.1-201ENST00000625111 1658 ntBASIC13.25□□□□□ -0.29
ZIC3O60481 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.25□□□□□ -0.29
ZIC3O60481 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.25□□□□□ -0.29
ZIC3O60481 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.25□□□□□ -0.29
ZIC3O60481 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.25□□□□□ -0.29
ZIC3O60481 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.25□□□□□ -0.29
ZIC3O60481 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.25□□□□□ -0.29
ZIC3O60481 AC099548.2-209ENST00000480264 625 ntBASIC13.25□□□□□ -0.29
ZIC3O60481 AC091804.1-201ENST00000486888 567 ntBASIC13.25□□□□□ -0.29
ZIC3O60481 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.25□□□□□ -0.29
ZIC3O60481 AC005740.2-201ENST00000511085 419 ntBASIC13.25□□□□□ -0.29
ZIC3O60481 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 SNORD3B-2-202ENST00000571722 791 ntBASIC13.25□□□□□ -0.29
ZIC3O60481 AC008805.1-201ENST00000590892 364 ntBASIC13.25□□□□□ -0.29
ZIC3O60481 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 INTS4P1-203ENST00000641008 3683 ntBASIC13.25□□□□□ -0.29
ZIC3O60481 AC215219.1-201ENST00000400706 1817 ntBASIC13.25□□□□□ -0.29
ZIC3O60481 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
ZIC3O60481 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.25□□□□□ -0.29
ZIC3O60481 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ZIC3O60481 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZIC3O60481 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ZIC3O60481 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
ZIC3O60481 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ZIC3O60481 FAM90A7P-201ENST00000382628 1395 ntBASIC13.24□□□□□ -0.29
ZIC3O60481 FAM90A23P-201ENST00000400136 1395 ntBASIC13.24□□□□□ -0.29
ZIC3O60481 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC3O60481 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ZIC3O60481 TPT1P11-201ENST00000458482 498 ntBASIC13.24□□□□□ -0.29
ZIC3O60481 AKR7A2P1-201ENST00000460134 915 ntBASIC13.24□□□□□ -0.29
ZIC3O60481 AC022447.6-201ENST00000515522 438 ntBASIC13.24□□□□□ -0.29
ZIC3O60481 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.24□□□□□ -0.29
ZIC3O60481 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 RBM8B-201ENST00000555532 525 ntBASIC13.24□□□□□ -0.29
ZIC3O60481 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.24□□□□□ -0.29
ZIC3O60481 AC090164.2-201ENST00000611487 516 ntBASIC13.24□□□□□ -0.29
ZIC3O60481 AC244452.3-201ENST00000636814 210 ntBASIC13.24□□□□□ -0.29
ZIC3O60481 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ZIC3O60481 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ZIC3O60481 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms