Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 CNN2P8-201ENST00000421872 913 ntBASIC12.6□□□□□ -0.39
CLN8Q9UBY8 FAM21FP-201ENST00000426241 1131 ntBASIC12.6□□□□□ -0.39
CLN8Q9UBY8 FAM197Y7-201ENST00000432892 766 ntBASIC12.6□□□□□ -0.39
CLN8Q9UBY8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 RPS2P32-201ENST00000439199 892 ntBASIC12.6□□□□□ -0.39
CLN8Q9UBY8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 YBX1P6-201ENST00000442962 1002 ntBASIC12.6□□□□□ -0.39
CLN8Q9UBY8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 AC023310.1-201ENST00000554836 735 ntBASIC12.6□□□□□ -0.39
CLN8Q9UBY8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 ENPP7P14-201ENST00000621765 1040 ntBASIC12.6□□□□□ -0.39
CLN8Q9UBY8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLN8Q9UBY8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AL354989.2-201ENST00000435838 1540 ntBASIC12.59□□□□□ -0.39
CLN8Q9UBY8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 HLA-V-201ENST00000429037 534 ntBASIC12.59□□□□□ -0.39
CLN8Q9UBY8 HLA-K-203ENST00000430151 1046 ntBASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AC245100.3-201ENST00000441281 285 ntBASIC12.59□□□□□ -0.39
CLN8Q9UBY8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AC119751.2-201ENST00000504529 210 ntBASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AC078819.1-201ENST00000547454 765 ntBASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AC012085.1-201ENST00000548270 765 ntBASIC12.59□□□□□ -0.39
CLN8Q9UBY8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.59□□□□□ -0.39
CLN8Q9UBY8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 GRK6P1-201ENST00000400595 1711 ntBASIC12.59□□□□□ -0.39
CLN8Q9UBY8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLN8Q9UBY8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms