Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
DDX11Q96FC9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DDX11Q96FC9 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 MIR1202-201ENST00000408529 83 ntBASIC17.64■□□□□ 0.41
DDX11Q96FC9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 KLF2P2-201ENST00000416807 1039 ntBASIC17.64■□□□□ 0.41
DDX11Q96FC9 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 AL118558.3-201ENST00000607414 1079 ntBASIC17.64■□□□□ 0.41
DDX11Q96FC9 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX11Q96FC9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX11Q96FC9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 AL645937.2-201ENST00000396808 931 ntBASIC17.63■□□□□ 0.41
DDX11Q96FC9 AL139094.1-201ENST00000405549 1188 ntBASIC17.63■□□□□ 0.41
DDX11Q96FC9 NUS1P3-201ENST00000423502 862 ntBASIC17.63■□□□□ 0.41
DDX11Q96FC9 Z93015.1-201ENST00000451718 390 ntBASIC17.63■□□□□ 0.41
DDX11Q96FC9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 FAM86HP-204ENST00000513466 959 ntBASIC17.63■□□□□ 0.41
DDX11Q96FC9 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.63■□□□□ 0.41
DDX11Q96FC9 MIR3615-201ENST00000581999 87 ntBASIC17.63■□□□□ 0.41
DDX11Q96FC9 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 PRSS30P-206ENST00000641773 873 ntBASIC17.63■□□□□ 0.41
DDX11Q96FC9 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX11Q96FC9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 KRT8P14-201ENST00000414254 1442 ntBASIC17.63■□□□□ 0.41
DDX11Q96FC9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX11Q96FC9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 ACTBP8-201ENST00000403258 1108 ntBASIC17.62■□□□□ 0.41
DDX11Q96FC9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 GPAA1P2-201ENST00000417923 928 ntBASIC17.62■□□□□ 0.41
DDX11Q96FC9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX11Q96FC9 AL590640.2-201ENST00000457038 527 ntBASIC17.62■□□□□ 0.41
DDX11Q96FC9 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.62■□□□□ 0.41
DDX11Q96FC9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms