Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AC015688.4-201ENST00000580780 1647 ntBASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 CETN4P-206ENST00000642099 2168 ntBASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 AC023274.1-201ENST00000418278 595 ntBASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 KRT18P32-201ENST00000424695 1287 ntBASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 GPS2P2-201ENST00000430745 888 ntBASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 SPDYE14P-201ENST00000442619 822 ntBASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 DUX4L47-201ENST00000566374 394 ntBASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CKAP2Q8WWK9 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 TUBB8P4-201ENST00000511806 1324 ntBASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CKAP2Q8WWK9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms