Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR1226-201ENST00000408658 75 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AP000244.1-201ENST00000424582 201 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 RN7SL455P-201ENST00000580629 282 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 FAM226B-201ENST00000602508 1490 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AL365203.3-201ENST00000609742 2057 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 DOC2GP-204ENST00000639052 2548 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AL161932.2-201ENST00000435436 679 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 ASS1P2-201ENST00000439895 1223 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AL049840.2-201ENST00000602722 535 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 CSTP2-201ENST00000610599 398 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 AC006987.1-201ENST00000413610 527 ntBASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 MED15P3-201ENST00000413613 326 ntBASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 B9D1-206ENST00000461069 923 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 AC092910.2-201ENST00000491262 348 ntBASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 MST1L-204ENST00000545160 559 ntTSL 4 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 RPL4P6-201ENST00000438116 1304 ntBASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 AC126365.1-201ENST00000578585 1514 ntBASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 MROH4P-201ENST00000431302 1578 ntBASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 DPY19L2P4-201ENST00000479881 442 ntBASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 SRP14-208ENST00000560773 468 ntTSL 3 BASIC9.59□□□□□ -0.87
ALMS1Q8TCU4 RN7SL524P-201ENST00000581152 300 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms