Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 AC108725.1-201ENST00000495472 409 ntBASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 EEF1DP1-201ENST00000585891 896 ntBASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 AC005252.3-201ENST00000623855 2258 ntBASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFWD3Q6PCD5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 AP000593.2-201ENST00000542775 1433 ntBASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 RN7SKP230-201ENST00000365642 335 ntBASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 AC004945.1-201ENST00000416738 983 ntBASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 AC138696.2-201ENST00000607376 223 ntBASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 AC091271.1-201ENST00000611877 1162 ntBASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RFWD3Q6PCD5 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.46■□□□□ 0.06
RFWD3Q6PCD5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
RFWD3Q6PCD5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
RFWD3Q6PCD5 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RFWD3Q6PCD5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
RFWD3Q6PCD5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFWD3Q6PCD5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFWD3Q6PCD5 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.45■□□□□ 0.06
RFWD3Q6PCD5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.45■□□□□ 0.06
RFWD3Q6PCD5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD3Q6PCD5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.45■□□□□ 0.06
RFWD3Q6PCD5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD3Q6PCD5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFWD3Q6PCD5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms