Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
HSPG2P98160 BX322562.1-201ENST00000617004 561 ntBASIC8.78□□□□□ -1
HSPG2P98160 AC127002.1-201ENST00000619123 455 ntBASIC8.78□□□□□ -1
HSPG2P98160 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC8.78□□□□□ -1
HSPG2P98160 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
HSPG2P98160 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
HSPG2P98160 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 GH1-203ENST00000351388 685 ntTSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 MPV17-209ENST00000405983 859 ntTSL 5 BASIC8.78□□□□□ -1
HSPG2P98160 AL359092.2-201ENST00000423330 585 ntBASIC8.78□□□□□ -1
HSPG2P98160 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC8.78□□□□□ -1
HSPG2P98160 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC8.78□□□□□ -1
HSPG2P98160 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC8.78□□□□□ -1
HSPG2P98160 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC8.78□□□□□ -1
HSPG2P98160 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 Z98885.3-201ENST00000624882 1757 ntBASIC8.78□□□□□ -1
HSPG2P98160 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 AC112693.3-201ENST00000624819 1983 ntBASIC8.78□□□□□ -1
HSPG2P98160 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC8.78□□□□□ -1
HSPG2P98160 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC8.78□□□□□ -1
HSPG2P98160 TPT1P11-201ENST00000458482 498 ntBASIC8.78□□□□□ -1
HSPG2P98160 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC8.78□□□□□ -1
HSPG2P98160 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC8.78□□□□□ -1
HSPG2P98160 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC8.78□□□□□ -1
HSPG2P98160 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 AC084018.2-201ENST00000613093 2607 ntBASIC8.78□□□□□ -1
HSPG2P98160 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HSPG2P98160 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
HSPG2P98160 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
HSPG2P98160 AC079325.1-201ENST00000430386 857 ntBASIC8.77□□□□□ -1
HSPG2P98160 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC8.77□□□□□ -1
HSPG2P98160 SRPK2P-201ENST00000523408 1100 ntBASIC8.77□□□□□ -1
HSPG2P98160 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1
HSPG2P98160 AC005332.2-201ENST00000590010 930 ntBASIC8.77□□□□□ -1
HSPG2P98160 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC8.77□□□□□ -1
HSPG2P98160 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC8.77□□□□□ -1
HSPG2P98160 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
HSPG2P98160 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HSPG2P98160 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HSPG2P98160 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
HSPG2P98160 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC8.77□□□□□ -1
HSPG2P98160 ACE-203ENST00000413513 2237 ntTSL 2 BASIC8.77□□□□□ -1
HSPG2P98160 POLL-206ENST00000370172 2308 ntTSL 2 BASIC8.77□□□□□ -1
HSPG2P98160 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
HSPG2P98160 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HSPG2P98160 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HSPG2P98160 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC8.77□□□□□ -1
HSPG2P98160 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC8.77□□□□□ -1
HSPG2P98160 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
HSPG2P98160 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC8.77□□□□□ -1.01
HSPG2P98160 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC8.77□□□□□ -1.01
HSPG2P98160 CETN3-205ENST00000522842 664 ntTSL 2 BASIC8.77□□□□□ -1.01
HSPG2P98160 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC8.77□□□□□ -1.01
HSPG2P98160 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC8.77□□□□□ -1.01
HSPG2P98160 AC092115.1-201ENST00000566277 1402 ntBASIC8.77□□□□□ -1.01
HSPG2P98160 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
HSPG2P98160 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC8.77□□□□□ -1.01
HSPG2P98160 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC8.77□□□□□ -1.01
HSPG2P98160 AC232323.1-201ENST00000540724 2099 ntBASIC8.77□□□□□ -1.01
HSPG2P98160 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
HSPG2P98160 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC8.77□□□□□ -1.01
HSPG2P98160 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
HSPG2P98160 DNM1P48-201ENST00000419538 439 ntBASIC8.77□□□□□ -1.01
HSPG2P98160 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
HSPG2P98160 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HSPG2P98160 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
HSPG2P98160 AL031673.1-201ENST00000611460 466 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms