Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RFC3P40938 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
RFC3P40938 POM121L10P-201ENST00000436994 1285 ntBASIC13.62□□□□□ -0.23
RFC3P40938 AC004898.1-201ENST00000451057 766 ntBASIC13.62□□□□□ -0.23
RFC3P40938 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.62□□□□□ -0.23
RFC3P40938 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.62□□□□□ -0.23
RFC3P40938 AC021723.1-201ENST00000486306 515 ntBASIC13.62□□□□□ -0.23
RFC3P40938 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 HIST2H2BC-201ENST00000498492 580 ntBASIC13.62□□□□□ -0.23
RFC3P40938 AC044849.1-201ENST00000519737 1188 ntBASIC13.62□□□□□ -0.23
RFC3P40938 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.62□□□□□ -0.23
RFC3P40938 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.62□□□□□ -0.23
RFC3P40938 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.62□□□□□ -0.23
RFC3P40938 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.62□□□□□ -0.23
RFC3P40938 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 AC020914.3-201ENST00000594712 304 ntBASIC13.62□□□□□ -0.23
RFC3P40938 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.62□□□□□ -0.23
RFC3P40938 AC244452.3-201ENST00000636814 210 ntBASIC13.62□□□□□ -0.23
RFC3P40938 AC002472.3-201ENST00000640124 621 ntBASIC13.62□□□□□ -0.23
RFC3P40938 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RFC3P40938 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RFC3P40938 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.62□□□□□ -0.23
RFC3P40938 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RFC3P40938 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RFC3P40938 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.62□□□□□ -0.23
RFC3P40938 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RFC3P40938 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RFC3P40938 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.62□□□□□ -0.23
RFC3P40938 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFC3P40938 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.62□□□□□ -0.23
RFC3P40938 MYO15B-237ENST00000642007 4893 ntBASIC13.62□□□□□ -0.23
RFC3P40938 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RFC3P40938 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RFC3P40938 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.61□□□□□ -0.23
RFC3P40938 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 AC126365.1-201ENST00000578585 1514 ntBASIC13.61□□□□□ -0.23
RFC3P40938 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RFC3P40938 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RFC3P40938 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.61□□□□□ -0.23
RFC3P40938 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 RN7SKP175-201ENST00000408472 289 ntBASIC13.61□□□□□ -0.23
RFC3P40938 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.61□□□□□ -0.23
RFC3P40938 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 RNMTL1P1-201ENST00000454103 560 ntBASIC13.61□□□□□ -0.23
RFC3P40938 IGHJ2P-201ENST00000454480 60 ntBASIC13.61□□□□□ -0.23
RFC3P40938 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.61□□□□□ -0.23
RFC3P40938 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.61□□□□□ -0.23
RFC3P40938 AL358472.3-201ENST00000608147 415 ntBASIC13.61□□□□□ -0.23
RFC3P40938 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.61□□□□□ -0.23
RFC3P40938 AL021578.1-201ENST00000613646 709 ntBASIC13.61□□□□□ -0.23
RFC3P40938 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.61□□□□□ -0.23
RFC3P40938 AC068587.10-201ENST00000641210 219 ntBASIC13.61□□□□□ -0.23
RFC3P40938 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
RFC3P40938 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 AP000593.2-201ENST00000542775 1433 ntBASIC13.61□□□□□ -0.23
RFC3P40938 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 AC023090.2-201ENST00000625182 2110 ntBASIC13.61□□□□□ -0.23
RFC3P40938 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
RFC3P40938 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.61□□□□□ -0.23
RFC3P40938 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFC3P40938 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms