Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 AC011840.2-201ENST00000563063 1520 ntBASIC13.18□□□□□ -0.3
CD40LGP29965 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CD40LGP29965 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CD40LGP29965 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CD40LGP29965 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
CD40LGP29965 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CD40LGP29965 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CD40LGP29965 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 MIR940-201ENST00000401276 94 ntBASIC13.18□□□□□ -0.3
CD40LGP29965 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40LGP29965 AC007967.2-201ENST00000432613 625 ntBASIC13.18□□□□□ -0.3
CD40LGP29965 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40LGP29965 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.18□□□□□ -0.3
CD40LGP29965 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40LGP29965 AC034105.1-201ENST00000563488 319 ntBASIC13.18□□□□□ -0.3
CD40LGP29965 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40LGP29965 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40LGP29965 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.18□□□□□ -0.3
CD40LGP29965 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 BX324167.2-201ENST00000623717 3316 ntBASIC13.18□□□□□ -0.3
CD40LGP29965 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 PCDHA5-203ENST00000614258 4248 ntBASIC13.18□□□□□ -0.3
CD40LGP29965 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40LGP29965 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40LGP29965 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40LGP29965 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CD40LGP29965 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.17□□□□□ -0.3
CD40LGP29965 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.17□□□□□ -0.3
CD40LGP29965 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CD40LGP29965 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.17□□□□□ -0.3
CD40LGP29965 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.17□□□□□ -0.3
CD40LGP29965 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.17□□□□□ -0.3
CD40LGP29965 CYP4F24P-201ENST00000586049 1580 ntBASIC13.17□□□□□ -0.3
CD40LGP29965 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CD40LGP29965 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.17□□□□□ -0.3
CD40LGP29965 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.17□□□□□ -0.3
CD40LGP29965 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.17□□□□□ -0.3
CD40LGP29965 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.17□□□□□ -0.3
CD40LGP29965 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.17□□□□□ -0.3
CD40LGP29965 HCG4B-203ENST00000450128 991 ntBASIC13.17□□□□□ -0.3
CD40LGP29965 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.17□□□□□ -0.3
CD40LGP29965 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD40LGP29965 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 267.4 ms