Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.56□□□□□ -0.08
PEX1O43933 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.56□□□□□ -0.08
PEX1O43933 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.56□□□□□ -0.08
PEX1O43933 AC023310.3-201ENST00000557027 670 ntBASIC14.56□□□□□ -0.08
PEX1O43933 AC100756.1-201ENST00000562736 682 ntBASIC14.56□□□□□ -0.08
PEX1O43933 AC138749.3-201ENST00000567691 622 ntBASIC14.56□□□□□ -0.08
PEX1O43933 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.56□□□□□ -0.08
PEX1O43933 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.56□□□□□ -0.08
PEX1O43933 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 AC116165.1-201ENST00000611806 668 ntBASIC14.56□□□□□ -0.08
PEX1O43933 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PEX1O43933 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.56□□□□□ -0.08
PEX1O43933 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 NUTM2HP-201ENST00000442076 2498 ntBASIC14.56□□□□□ -0.08
PEX1O43933 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
PEX1O43933 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.56□□□□□ -0.08
PEX1O43933 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
PEX1O43933 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.56□□□□□ -0.08
PEX1O43933 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PEX1O43933 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.56□□□□□ -0.08
PEX1O43933 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 AC098614.1-201ENST00000368528 745 ntBASIC14.55□□□□□ -0.08
PEX1O43933 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
PEX1O43933 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 DGCR5-201ENST00000399539 862 ntBASIC14.55□□□□□ -0.08
PEX1O43933 COX5BP8-201ENST00000416911 349 ntBASIC14.55□□□□□ -0.08
PEX1O43933 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.55□□□□□ -0.08
PEX1O43933 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 EEF1DP4-201ENST00000446006 880 ntBASIC14.55□□□□□ -0.08
PEX1O43933 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.55□□□□□ -0.08
PEX1O43933 AC092337.1-201ENST00000568699 1129 ntBASIC14.55□□□□□ -0.08
PEX1O43933 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.55□□□□□ -0.08
PEX1O43933 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.55□□□□□ -0.08
PEX1O43933 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.55□□□□□ -0.08
PEX1O43933 AC008494.3-201ENST00000606615 944 ntBASIC14.55□□□□□ -0.08
PEX1O43933 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PEX1O43933 CU639417.3-201ENST00000624240 1404 ntBASIC14.55□□□□□ -0.08
PEX1O43933 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PEX1O43933 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PEX1O43933 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PEX1O43933 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PEX1O43933 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PEX1O43933 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.55□□□□□ -0.08
PEX1O43933 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PEX1O43933 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.54□□□□□ -0.08
PEX1O43933 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.54□□□□□ -0.08
PEX1O43933 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.54□□□□□ -0.08
PEX1O43933 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.54□□□□□ -0.08
PEX1O43933 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PEX1O43933 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.54□□□□□ -0.08
PEX1O43933 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.54□□□□□ -0.08
PEX1O43933 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms