Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
NDUFA1O15239 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
NDUFA1O15239 AC093520.2-201ENST00000561830 333 ntBASIC10.2□□□□□ -0.78
NDUFA1O15239 Z97205.2-201ENST00000564697 1639 ntBASIC10.2□□□□□ -0.78
NDUFA1O15239 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.2□□□□□ -0.78
NDUFA1O15239 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NDUFA1O15239 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
NDUFA1O15239 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.2□□□□□ -0.78
NDUFA1O15239 AC010327.4-202ENST00000591484 748 ntBASIC10.2□□□□□ -0.78
NDUFA1O15239 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NDUFA1O15239 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.2□□□□□ -0.78
NDUFA1O15239 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.2□□□□□ -0.78
NDUFA1O15239 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NDUFA1O15239 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
NDUFA1O15239 LINC00628-201ENST00000628516 1289 ntBASIC10.2□□□□□ -0.78
NDUFA1O15239 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NDUFA1O15239 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
NDUFA1O15239 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
NDUFA1O15239 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NDUFA1O15239 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
NDUFA1O15239 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.2□□□□□ -0.78
NDUFA1O15239 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
NDUFA1O15239 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
NDUFA1O15239 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
NDUFA1O15239 NUTM2HP-201ENST00000442076 2498 ntBASIC10.19□□□□□ -0.78
NDUFA1O15239 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.19□□□□□ -0.78
NDUFA1O15239 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.19□□□□□ -0.78
NDUFA1O15239 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.19□□□□□ -0.78
NDUFA1O15239 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
NDUFA1O15239 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 RN7SL618P-201ENST00000477850 296 ntBASIC10.19□□□□□ -0.78
NDUFA1O15239 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.19□□□□□ -0.78
NDUFA1O15239 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.19□□□□□ -0.78
NDUFA1O15239 AC074044.1-201ENST00000609673 707 ntBASIC10.19□□□□□ -0.78
NDUFA1O15239 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
NDUFA1O15239 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
NDUFA1O15239 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
NDUFA1O15239 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms