Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 TLE1P1-201ENST00000422965 589 ntBASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 GOLGA2P4-201ENST00000441462 777 ntBASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 HOMER2P2-201ENST00000451621 847 ntBASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 HSPA7-201ENST00000445535 1927 ntBASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPDC1A2A3K4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AC020907.1-201ENST00000616460 1350 ntBASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 RN7SKP230-201ENST00000365642 335 ntBASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 BTBD6P1-201ENST00000412176 1267 ntBASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AC245100.3-201ENST00000441281 285 ntBASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AP006547.1-201ENST00000563435 692 ntBASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AL118558.3-201ENST00000607414 1079 ntBASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AC244093.1-201ENST00000610837 814 ntBASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 AL138725.1-201ENST00000407347 1314 ntBASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 OR2I1P-210ENST00000642037 4691 ntBASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PTPDC1A2A3K4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 FAM8A4P-201ENST00000435433 1213 ntBASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPDC1A2A3K4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms