Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMC4Q9NTJ3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 AL136309.1-201ENST00000403917 691 ntBASIC19■□□□□ 0.63
SMC4Q9NTJ3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 CNN2P10-201ENST00000443067 918 ntBASIC19■□□□□ 0.63
SMC4Q9NTJ3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 HNRNPA1P48-202ENST00000565308 961 ntBASIC19■□□□□ 0.63
SMC4Q9NTJ3 AL358472.3-201ENST00000608147 415 ntBASIC19■□□□□ 0.63
SMC4Q9NTJ3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 AC008687.7-202ENST00000637404 953 ntBASIC19■□□□□ 0.63
SMC4Q9NTJ3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMC4Q9NTJ3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19■□□□□ 0.63
SMC4Q9NTJ3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 AC022210.1-201ENST00000449856 793 ntBASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 MYADML-201ENST00000474610 2147 ntBASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 ZACNP1-201ENST00000612259 710 ntBASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 AC139712.1-201ENST00000378256 1875 ntBASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SMC4Q9NTJ3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 AC099336.1-201ENST00000417053 1171 ntBASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 AC079316.1-201ENST00000548397 411 ntBASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 AC103988.2-201ENST00000561804 725 ntBASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMC4Q9NTJ3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms