Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TMBIM7P-202ENST00000641474 1516 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 LINC01230-201ENST00000625222 3017 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC006058.4-201ENST00000624016 1670 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC104640.1-201ENST00000562617 2109 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AP001267.2-201ENST00000532619 2086 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 OR2K2-202ENST00000374428 1038 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 NDUFAB1P1-201ENST00000404262 460 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC245884.6-201ENST00000515672 1067 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC103988.2-201ENST00000561804 725 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC013355.1-201ENST00000562625 723 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 AC022148.2-201ENST00000586176 560 ntBASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
KRTAP4-3Q9BYR4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms