Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 KRT90P-201ENST00000549264 1064 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 ECM1P1-201ENST00000604092 1279 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 BX088702.1-201ENST00000610784 235 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AC138951.2-201ENST00000623455 1161 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 RHOXF1P1-202ENST00000635473 501 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AL136172.1-201ENST00000598590 1394 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AL354989.2-201ENST00000435838 1540 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AC092053.3-201ENST00000641308 4975 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AC005089.1-201ENST00000619486 2241 ntBASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AC006001.1-201ENST00000325130 474 ntBASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 RN7SKP230-201ENST00000365642 335 ntBASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AC005034.1-201ENST00000426657 489 ntBASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 FAM197Y7-201ENST00000432892 766 ntBASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AP000812.2-201ENST00000538934 718 ntBASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AC106820.3-201ENST00000561653 397 ntBASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AC007686.3-201ENST00000619017 3487 ntBASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 AC011840.2-201ENST00000563063 1520 ntBASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SRFBP1Q8NEF9 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SRFBP1Q8NEF9 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.18□□□□□ -0.14
SRFBP1Q8NEF9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRFBP1Q8NEF9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SRFBP1Q8NEF9 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms