Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SIMC1Q8NDZ2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 AC027601.5-201ENST00000624065 2482 ntBASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 AL590640.2-201ENST00000457038 527 ntBASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
SIMC1Q8NDZ2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 AC005229.1-201ENST00000392885 409 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 POM121L8P-201ENST00000417732 1281 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 POM121L9P-203ENST00000441984 1285 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 FTH1P14-201ENST00000482930 551 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 IGHV3-71-201ENST00000523324 359 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 BTNL10-201ENST00000595971 695 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 AC233724.13-201ENST00000598383 410 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 MIR6799-201ENST00000620297 69 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 AC097376.2-205ENST00000610159 5334 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 AC020910.5-201ENST00000623668 1865 ntBASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIMC1Q8NDZ2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms