Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA4P43681 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.96□□□□□ -0.02
CHRNA4P43681 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.96□□□□□ -0.02
CHRNA4P43681 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.96□□□□□ -0.02
CHRNA4P43681 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA4P43681 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CHRNA4P43681 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 AC012617.1-204ENST00000586340 2305 ntBASIC14.95□□□□□ -0.02
CHRNA4P43681 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.95□□□□□ -0.02
CHRNA4P43681 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.95□□□□□ -0.02
CHRNA4P43681 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 AP000812.2-201ENST00000538934 718 ntBASIC14.95□□□□□ -0.02
CHRNA4P43681 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.95□□□□□ -0.02
CHRNA4P43681 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CHRNA4P43681 RAB43P1-201ENST00000561790 589 ntBASIC14.95□□□□□ -0.02
CHRNA4P43681 AC106886.1-201ENST00000568660 600 ntBASIC14.95□□□□□ -0.02
CHRNA4P43681 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.95□□□□□ -0.02
CHRNA4P43681 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CHRNA4P43681 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNA4P43681 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNA4P43681 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
CHRNA4P43681 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CHRNA4P43681 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CHRNA4P43681 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 MIR1909-201ENST00000411312 80 ntBASIC14.94□□□□□ -0.02
CHRNA4P43681 CD8B2-202ENST00000417670 633 ntBASIC14.94□□□□□ -0.02
CHRNA4P43681 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 AC234783.1-201ENST00000441761 496 ntBASIC14.94□□□□□ -0.02
CHRNA4P43681 MYADML-201ENST00000474610 2147 ntBASIC14.94□□□□□ -0.02
CHRNA4P43681 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.94□□□□□ -0.02
CHRNA4P43681 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRNA4P43681 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRNA4P43681 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CHRNA4P43681 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 AP001002.3-201ENST00000623482 206 ntBASIC14.94□□□□□ -0.02
CHRNA4P43681 RHOXF1P1-202ENST00000635473 501 ntBASIC14.94□□□□□ -0.02
CHRNA4P43681 AC002472.3-201ENST00000640124 621 ntBASIC14.94□□□□□ -0.02
CHRNA4P43681 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CHRNA4P43681 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CHRNA4P43681 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNA4P43681 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 KRT8P4-201ENST00000509735 1454 ntBASIC14.94□□□□□ -0.02
CHRNA4P43681 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms