Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AC023090.2-201ENST00000625182 2110 ntBASIC14.17□□□□□ -0.14
CCDC88CQ9P219 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 AC113367.3-201ENST00000508316 1912 ntBASIC14.16□□□□□ -0.14
CCDC88CQ9P219 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 AC018735.1-201ENST00000437208 1502 ntBASIC14.16□□□□□ -0.14
CCDC88CQ9P219 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 MESTP3-201ENST00000503460 968 ntBASIC14.16□□□□□ -0.14
CCDC88CQ9P219 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 AC013355.1-201ENST00000562625 723 ntBASIC14.16□□□□□ -0.14
CCDC88CQ9P219 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCDC88CQ9P219 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 AC009093.2-202ENST00000620513 2079 ntBASIC14.15□□□□□ -0.14
CCDC88CQ9P219 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC88CQ9P219 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms