Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 AC114812.1-204ENST00000449669 728 ntBASIC14.72□□□□□ -0.05
SSU72Q9NP77 RPL13AP25-201ENST00000484130 612 ntBASIC14.72□□□□□ -0.05
SSU72Q9NP77 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSU72Q9NP77 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.72□□□□□ -0.05
SSU72Q9NP77 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 KRT18P8-201ENST00000581937 1246 ntBASIC14.71□□□□□ -0.05
SSU72Q9NP77 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.71□□□□□ -0.05
SSU72Q9NP77 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSU72Q9NP77 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
SSU72Q9NP77 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSU72Q9NP77 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SSU72Q9NP77 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSU72Q9NP77 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSU72Q9NP77 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.71□□□□□ -0.06
SSU72Q9NP77 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SSU72Q9NP77 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSU72Q9NP77 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
SSU72Q9NP77 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
SSU72Q9NP77 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 EIF3FP3-201ENST00000434851 1086 ntBASIC14.7□□□□□ -0.06
SSU72Q9NP77 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.7□□□□□ -0.06
SSU72Q9NP77 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSU72Q9NP77 AC135782.3-201ENST00000562782 2105 ntBASIC14.7□□□□□ -0.06
SSU72Q9NP77 RARRES2P5-201ENST00000564013 466 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms