Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDH19Q8TAB3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 CNN2P8-201ENST00000421872 913 ntBASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 AC007551.1-201ENST00000457394 519 ntBASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 AC104989.1-201ENST00000519711 778 ntBASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 OR10B1P-201ENST00000601666 907 ntBASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 AC215219.1-201ENST00000400706 1817 ntBASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH19Q8TAB3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 AC139712.1-201ENST00000378256 1875 ntBASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 AC004945.1-201ENST00000416738 983 ntBASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 FAM8A4P-201ENST00000435433 1213 ntBASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 ALG3P1-201ENST00000508806 1114 ntBASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 KRT90P-201ENST00000549264 1064 ntBASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH19Q8TAB3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms