Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 CNN2P8-201ENST00000421872 913 ntBASIC15.13■□□□□ 0.01
PTPN3P26045 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 AC007551.1-201ENST00000457394 519 ntBASIC15.13■□□□□ 0.01
PTPN3P26045 ALG3P1-201ENST00000508806 1114 ntBASIC15.13■□□□□ 0.01
PTPN3P26045 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN3P26045 AC078819.1-201ENST00000547454 765 ntBASIC15.13■□□□□ 0.01
PTPN3P26045 AC012085.1-201ENST00000548270 765 ntBASIC15.13■□□□□ 0.01
PTPN3P26045 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 AC005225.4-201ENST00000557330 545 ntBASIC15.13■□□□□ 0.01
PTPN3P26045 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN3P26045 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PTPN3P26045 OR10B1P-201ENST00000601666 907 ntBASIC15.13■□□□□ 0.01
PTPN3P26045 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN3P26045 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.13■□□□□ 0.01
PTPN3P26045 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN3P26045 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN3P26045 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN3P26045 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN3P26045 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN3P26045 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN3P26045 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
PTPN3P26045 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN3P26045 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PTPN3P26045 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PTPN3P26045 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PTPN3P26045 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN3P26045 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN3P26045 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN3P26045 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 CD8B2-202ENST00000417670 633 ntBASIC15.12■□□□□ 0.01
PTPN3P26045 FAM8A4P-201ENST00000435433 1213 ntBASIC15.12■□□□□ 0.01
PTPN3P26045 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN3P26045 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN3P26045 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
PTPN3P26045 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN3P26045 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN3P26045 AC103988.2-201ENST00000561804 725 ntBASIC15.12■□□□□ 0.01
PTPN3P26045 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.12■□□□□ 0.01
PTPN3P26045 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 LINC02084-201ENST00000606069 1096 ntBASIC15.12■□□□□ 0.01
PTPN3P26045 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PTPN3P26045 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 AC138951.2-201ENST00000623455 1161 ntBASIC15.12■□□□□ 0.01
PTPN3P26045 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN3P26045 AC006453.4-201ENST00000636949 1252 ntBASIC15.12■□□□□ 0.01
PTPN3P26045 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN3P26045 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN3P26045 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
PTPN3P26045 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
PTPN3P26045 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PTPN3P26045 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN3P26045 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN3P26045 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN3P26045 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
PTPN3P26045 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PTPN3P26045 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PTPN3P26045 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN3P26045 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms