Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NPIPA3F8WFD2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 POM121L10P-201ENST00000436994 1285 ntBASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AC026434.2-201ENST00000506094 1078 ntBASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 DUX4L47-201ENST00000566374 394 ntBASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AL137783.1-201ENST00000623494 1896 ntBASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 FKBP4P6-201ENST00000457486 1332 ntBASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA3F8WFD2 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 LINC00528-201ENST00000600723 2160 ntBASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 FNTAP2-201ENST00000430308 634 ntBASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 HIST2H2BB-201ENST00000449108 381 ntBASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms