Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 RN7SKP230-201ENST00000365642 335 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 MIR557-201ENST00000385239 98 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AC004837.1-201ENST00000446267 564 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 NUDT4P2-201ENST00000578341 546 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AC007326.1-201ENST00000604539 458 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AP003392.6-201ENST00000607709 325 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AC025262.2-201ENST00000623975 1056 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AC104640.1-201ENST00000562617 2109 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AC090502.4-201ENST00000551714 1386 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C4orf47A7E2U8 AC103702.1-201ENST00000548801 2630 ntBASIC14.45□□□□□ -0.1
C4orf47A7E2U8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 RPL5P21-201ENST00000404620 815 ntBASIC14.44□□□□□ -0.1
C4orf47A7E2U8 BANF1P3-201ENST00000412556 261 ntBASIC14.44□□□□□ -0.1
C4orf47A7E2U8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 DUTP3-201ENST00000450025 415 ntBASIC14.44□□□□□ -0.1
C4orf47A7E2U8 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 TMCO5B-205ENST00000530020 894 ntBASIC14.44□□□□□ -0.1
C4orf47A7E2U8 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 AC144522.1-201ENST00000625111 1658 ntBASIC14.44□□□□□ -0.1
C4orf47A7E2U8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 LINC01165-201ENST00000445190 1623 ntBASIC14.44□□□□□ -0.1
C4orf47A7E2U8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C4orf47A7E2U8 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.43□□□□□ -0.1
C4orf47A7E2U8 AC092638.2-201ENST00000441105 947 ntBASIC14.43□□□□□ -0.1
C4orf47A7E2U8 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms