Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 AC007292.2-201ENST00000593524 1812 ntBASIC15.05■□□□□ -0
RAI2Q9Y5P3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.05■□□□□ -0
RAI2Q9Y5P3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
RAI2Q9Y5P3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 INTS4P1-203ENST00000641008 3683 ntBASIC15.04■□□□□ -0
RAI2Q9Y5P3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 KRT8P4-201ENST00000509735 1454 ntBASIC15.04■□□□□ -0
RAI2Q9Y5P3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 AC006033.1-201ENST00000440505 426 ntBASIC15.04■□□□□ -0
RAI2Q9Y5P3 CNN2P10-201ENST00000443067 918 ntBASIC15.04■□□□□ -0
RAI2Q9Y5P3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 GCOM2-201ENST00000509133 1104 ntBASIC15.04■□□□□ -0
RAI2Q9Y5P3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 MIR4683-201ENST00000579659 81 ntBASIC15.04■□□□□ -0
RAI2Q9Y5P3 PPY2P-201ENST00000582808 702 ntBASIC15.04■□□□□ -0
RAI2Q9Y5P3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAI2Q9Y5P3 AL390755.1-201ENST00000623716 2027 ntBASIC15.04■□□□□ -0
RAI2Q9Y5P3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.04■□□□□ -0
RAI2Q9Y5P3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 AL136172.1-201ENST00000598590 1394 ntBASIC15.03■□□□□ -0
RAI2Q9Y5P3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI2Q9Y5P3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.03■□□□□ -0
RAI2Q9Y5P3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms