Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 TUBB8P8-201ENST00000458717 1058 ntBASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 RN7SL163P-201ENST00000583100 276 ntBASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 AC026740.1-201ENST00000607068 791 ntBASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 AC100757.4-201ENST00000626934 759 ntBASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 AC004923.1-202ENST00000642106 209 ntBASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 AC013726.1-201ENST00000563747 2285 ntBASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 AGAP7P-201ENST00000582299 2062 ntBASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 AGAP14-201ENST00000624701 2060 ntBASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.88□□□□□ -0.03
TM9SF3Q9HD45 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 AC104581.4-201ENST00000623126 3052 ntBASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 AC004899.1-201ENST00000424687 1714 ntBASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 AL162426.1-201ENST00000624141 743 ntBASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 AC002472.3-201ENST00000640124 621 ntBASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 C8orf49-201ENST00000525043 1968 ntBASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 CICP11-201ENST00000434745 2827 ntBASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 AC126365.1-201ENST00000578585 1514 ntBASIC14.87□□□□□ -0.03
TM9SF3Q9HD45 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 AC008132.1-202ENST00000342005 1389 ntBASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 ACTG1P2-201ENST00000415776 1125 ntBASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 ACTG1P11-201ENST00000425411 1125 ntBASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TM9SF3Q9HD45 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms