Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AC244669.2-201ENST00000612320 853 ntBASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 AC013726.1-201ENST00000563747 2285 ntBASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PCGF1Q9BSM1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AC091951.1-201ENST00000512854 2465 ntBASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 KLF2P2-201ENST00000416807 1039 ntBASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AC114812.1-204ENST00000449669 728 ntBASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 MIR4259-201ENST00000584466 101 ntBASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AC145423.3-201ENST00000615987 467 ntBASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 CICP20-201ENST00000443330 2801 ntBASIC12.57□□□□□ -0.4
PCGF1Q9BSM1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AC007787.1-201ENST00000588095 1583 ntBASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AL158070.2-201ENST00000623713 1621 ntBASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 CICP11-201ENST00000434745 2827 ntBASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PCGF1Q9BSM1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms