Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.5□□□□□ -0.25
USB1Q9BQ65 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 KLF2P4-201ENST00000451959 1225 ntBASIC13.5□□□□□ -0.25
USB1Q9BQ65 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 BNIP3P35-201ENST00000604530 490 ntBASIC13.5□□□□□ -0.25
USB1Q9BQ65 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 AC132938.4-201ENST00000623835 848 ntBASIC13.5□□□□□ -0.25
USB1Q9BQ65 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
USB1Q9BQ65 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
USB1Q9BQ65 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 AC006486.2-201ENST00000624246 2199 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 AC138969.2-201ENST00000532739 9932 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 FO681548.1-201ENST00000455617 1132 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 AP000812.2-201ENST00000538934 718 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 AC063950.1-202ENST00000600133 568 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 RPSAP52-203ENST00000622976 1023 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 GAPDHP74-202ENST00000632456 782 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 COX11-210ENST00000639671 696 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 PRSS30P-206ENST00000641773 873 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 SSR4P1-203ENST00000599569 2260 ntBASIC13.49□□□□□ -0.25
USB1Q9BQ65 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms