Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 AC010141.1-201ENST00000411585 623 ntBASIC13.05□□□□□ -0.32
TMEM54Q969K7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM54Q969K7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM54Q969K7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 RN7SL832P-201ENST00000607781 1756 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 AC006504.5-208ENST00000588784 2401 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 OR2I1P-209ENST00000641730 5365 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AC126755.1-201ENST00000525846 6405 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AL035414.1-201ENST00000451327 857 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 CICP12-201ENST00000455801 843 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 GPR53P-205ENST00000457298 1084 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AP006547.1-201ENST00000563435 692 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 MIR6775-201ENST00000617557 69 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 AC027601.3-201ENST00000622907 509 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 KRT8P28-201ENST00000433288 1390 ntBASIC13.04□□□□□ -0.32
TMEM54Q969K7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM54Q969K7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM54Q969K7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
TMEM54Q969K7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 HSPA7-201ENST00000445535 1927 ntBASIC13.03□□□□□ -0.32
TMEM54Q969K7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM54Q969K7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms