Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 ACKR1-201ENST00000368121 1240 ntBASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 EIF3FP3-201ENST00000434851 1086 ntBASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 CLUHP6-201ENST00000580789 941 ntBASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 AL033527.5-201ENST00000641382 801 ntBASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAF3IP1Q8TDR0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 AP001267.2-201ENST00000532619 2086 ntBASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 SALL4P5-201ENST00000419001 1760 ntBASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 AC007969.1-201ENST00000433675 447 ntBASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 AC022447.6-201ENST00000515522 438 ntBASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 AL355385.1-201ENST00000606123 409 ntBASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP1Q8TDR0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP1Q8TDR0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms