Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC073869.4-201ENST00000620841 800 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 BX679664.3-201ENST00000414070 555 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC113935.1-201ENST00000471722 555 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 ALG1L15P-201ENST00000482834 794 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AP005264.5-201ENST00000590066 467 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 KF455155.1-201ENST00000604493 303 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC113385.2-201ENST00000614465 762 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 OR7E12P-201ENST00000344740 973 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC084262.1-201ENST00000567818 751 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 HLF-202ENST00000430986 1385 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 CASP2-203ENST00000392925 616 ntTSL 3 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 AC048382.6-201ENST00000621980 1223 ntBASIC9.64□□□□□ -0.87
ALMS1Q8TCU4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 CYP2T1P-202ENST00000641596 2535 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 HNRNPA1P10-201ENST00000444945 962 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 DKFZP434H168-201ENST00000567381 1905 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AL359219.1-201ENST00000556311 934 ntBASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
ALMS1Q8TCU4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms