Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FNDC9Q8TBE3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 FAM86MP-201ENST00000340703 885 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 MIR1908-201ENST00000410394 80 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 ACTBP11-201ENST00000436287 1126 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 HOMER2P2-201ENST00000451621 847 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 MESTP3-201ENST00000503460 968 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 AC106820.3-201ENST00000561653 397 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 C2orf69P2-201ENST00000562032 1123 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 RN7SL713P-201ENST00000582127 302 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 AC023908.3-201ENST00000564211 3047 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 AC087386.2-201ENST00000623212 4637 ntBASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.43□□□□□ -0.26
FNDC9Q8TBE3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 FKBP4P6-201ENST00000457486 1332 ntBASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 AC005089.1-201ENST00000619486 2241 ntBASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
FNDC9Q8TBE3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms