Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 TMBIM7P-203ENST00000641617 1718 ntBASIC15.8■□□□□ 0.12
RNF135Q8IUD6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 AC078991.1-201ENST00000437297 610 ntBASIC15.8■□□□□ 0.12
RNF135Q8IUD6 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 AL391280.1-201ENST00000506969 1062 ntBASIC15.8■□□□□ 0.12
RNF135Q8IUD6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF135Q8IUD6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 AC138035.3-201ENST00000622706 2791 ntBASIC15.79■□□□□ 0.12
RNF135Q8IUD6 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 PDIA3P2-201ENST00000428073 158 ntBASIC15.79■□□□□ 0.12
RNF135Q8IUD6 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 MARK2P5-201ENST00000507649 634 ntBASIC15.79■□□□□ 0.12
RNF135Q8IUD6 CTBP2P4-201ENST00000513884 920 ntBASIC15.79■□□□□ 0.12
RNF135Q8IUD6 AC005357.2-202ENST00000590507 1060 ntBASIC15.79■□□□□ 0.12
RNF135Q8IUD6 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 PRSS30P-206ENST00000641773 873 ntBASIC15.79■□□□□ 0.12
RNF135Q8IUD6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 AC004899.1-201ENST00000424687 1714 ntBASIC15.79■□□□□ 0.12
RNF135Q8IUD6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 AC084364.1-201ENST00000551967 1556 ntBASIC15.79■□□□□ 0.12
RNF135Q8IUD6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF135Q8IUD6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF135Q8IUD6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms